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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs145873752 chr20:44388819 A/G WFDC3 chr20:44376583-44420571:- 0.93 6.55 2.57E-8 Box Plot
ACC rs146115757 chr8:71768465 A/C XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs146216593 chr8:71666446 T/C XKR9 chr8:71581600-71702606:+ 0.65 6.54 2.65E-8 Box Plot
ACC rs146388137 chr2:61381035 A/AAAAG C2orf74 chr2:61372203-61391964:+ 0.64 6.39 4.64E-8 Box Plot
ACC rs146553409 chr8:71816818 G/A XKR9 chr8:71581600-71702606:+ 0.68 7.07 3.86E-9 Box Plot
ACC rs146721686 chr7:97408485 C/T TECPR1 chr7:97843936-97881563:- 0.83 5.33 2.18E-6 Box Plot
ACC rs146967748 chr4:56543552 C/CA ARL9 chr4:57371375-57390614:+ 1.25 5.34 2.11E-6 Box Plot
ACC rs147096909 chr7:97408591 T/A TECPR1 chr7:97843936-97881563:- 0.83 5.45 1.38E-6 Box Plot
ACC rs1471114 chr8:71675547 T/C XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs1472342 chr1:213058124 C/T LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs147601137 chr7:76292936 T/G POMZP3 chr7:76239303-76256578:- 0.99 5.94 2.38E-7 Box Plot
ACC rs1476756 chr7:76035847 C/T UPK3B chr7:76139745-76145838:+ 0.7 5.31 2.28E-6 Box Plot
ACC rs147684050 chr17:45903353 A/C SP6 chr17:45922274-45933240:- 0.63 5.54 1.0E-6 Box Plot
ACC rs1477364 chr5:96284892 C/T ERAP2 chr5:96211643-96255420:+ 0.93 11.09 2.62E-15 Box Plot
ACC rs147750632 chr16:50377831 C/A CYLD chr16:50775961-50835846:+ 0.59 5.41 1.59E-6 Box Plot